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A female voice declares that the Maze Trials were a complete success and that it's now time to begin Phase II. A man welcomes the youngsters to a facility where there are hundreds of other teens. They realize they weren't the only teens trapped in a maze.

The man asks Thomas if he'd like to know what happened, but first says he needs to know whose side he's on. Thomas begins to suspect that his group never escaped, and that they're being lied to. This time, the teens arm themselves and really escape, but find themselves in a massive desert known as "The Scorch."